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Alginate based gels are widely adopted in many pharmaceutical and biomedical fields. The main rheological characteristics of the alginate-based gels are important design parameters for gel preparation. A new methodology for rheological tests on the alginate-based gels has been assessed in order to obtain reliable and reproducible results in terms of loss and storage moduli. The methodology accounts for the effect of morphology on the rheological properties. Reliable results can be achieved if the structure of the gel is preserved during