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We present numerical results for the synchronization phenomena in a bilayer network of repulsively coupled 2D lattices of van der Pol oscillators. We consider the cases when the network layers have either different or the same types of intra-layer coupling topology. When the layers are uncoupled, the lattice of van der Pol oscillators with a repulsive interaction typically demonstrates a labyrinth-like pattern, while the lattice with attractively coupled van der Pol oscillators shows a regular spiral wave structure. We reveal for the fi